The detailed information of tRNA gene sequence


Sequence ID>w028083
Genome IDABCS01000066
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 46454
End posion on genome 46530
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ataacttcaC
tRNA gene sequence 
GTCCCGTTCGTCTAGCGGTCAGGATGCTTGGTTCTCAGCCAGGTGGCAGGGGTTCGACTC
CCCTACGGGATGCTT
Downstream region at tRNA end position 
Catgacgaca
Secondary structure (Cloverleaf model)
>w028083	Glu	CTC
                   C      GCTT Catgacgaca
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | +                 T T
    T       G G A T
      C A          G     TGGC
                    C - G
                    T + G
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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