The detailed information of tRNA gene sequence


Sequence ID>w028082
Genome IDABCS01000066
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 46363
End posion on genome 46437
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cacgcgccaa
tRNA gene sequence 
GTCCCGTTCGTCCAATGGTCAGGATGGCTGGTTTTCAACCAGGAGACAGGGGTTCGACTC
CCCTACGGGATGCTC
Downstream region at tRNA end position 
atcatccata
Secondary structure (Cloverleaf model)
>w028082	Glu	TTC
                   a      GCTC atcatccata
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T C
                    T     T C C C C     A
      T A A        C      | | | | |     G
    G       C C T G       A G G G G     C
    G       | | | +                 T T
    T       G G A T
      C A          G     AGAC
                    G   G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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