The detailed information of tRNA gene sequence


Sequence ID>w028081
Genome IDABCS01000066
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 46259
End posion on genome 46335
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgcaacatcA
tRNA gene sequence 
GGGTCCGTAGCTGAGTGGTTTTAGCGTCGGTTTGTTAGCCCGGGGACGTGGGTTCGATTC
CCACCGGGCCCTCTT
Downstream region at tRNA end position 
Ggtcccccac
Secondary structure (Cloverleaf model)
>w028081	Asn	GTT
                   A      TCTT Ggtcccccac
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T T
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       G T C G       G T G G G     C
    G       + | | |                 T T
    T       T A G C
      T T          G     GGAC
                    T + G
                    C - G
                    G - C
                    G - C
                    T   C
                  T       G
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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