The detailed information of tRNA gene sequence


Sequence ID>w028080
Genome IDABCS01000065
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 44346
End posion on genome 44271
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gccacctcga
tRNA gene sequence 
AGGGCGTTAGCTCAGCTGGTAGAGCAGCGGACTCCAAATCCGCAGGCCGCGGGTTCGATC
CCTGCACGCCCTGCTC
Downstream region at tRNA end position 
cttcctctcc
Secondary structure (Cloverleaf model)
>w028080	Trp	CCA
                   a      GCTC cttcctctcc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          C T
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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