The detailed information of tRNA gene sequence


Sequence ID>w028070
Genome IDABCS01000038
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 49598
End posion on genome 49524
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcaccccaga
tRNA gene sequence 
GGGCGCGTAACTCAGTGGTAGAGTGCCACCTTCACACGGTGGAAGTCACAGGTTCAAGTC
CTGTCGCGCCCAACC
Downstream region at tRNA end position 
cgagacggcc
Secondary structure (Cloverleaf model)
>w028070	Val	CAC
                   a      AACC cgagacggcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
        G A        A      | | | | |     A
      T     C T C A       A C A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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