The detailed information of tRNA gene sequence


Sequence ID>w028063
Genome IDABCS01000024
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 17242
End posion on genome 17317
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggtcgcac
tRNA gene sequence 
GCTGGGATGGCCGAGTGGTTCAGGCAGCGGACTCATAGCCCGCCCGACGTGGGTTCGATC
CCCACTCCCAGTACTG
Downstream region at tRNA end position 
gtgacgcgca
Secondary structure (Cloverleaf model)
>w028063	Met	CAT
                   c      ACTG gtgacgcgca
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          C T
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T C          A     CCGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A   C
                  C       G
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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