The detailed information of tRNA gene sequence


Sequence ID>w028061
Genome IDABCS01000024
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 16920
End posion on genome 16997
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcaccgcacT
tRNA gene sequence 
CGGCCTGTAGTTCAACGGTGAGAACGTCCGTCTGATGAGCGGGATGTTGCTGGTTCGATT
CCAGCCGGGCCGACTC
Downstream region at tRNA end position 
Tcacgccacc
Secondary structure (Cloverleaf model)
>w028061	Ile	GAT
                   T      ACTC Tcacgccacc
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C G A C C     A
      C A A        A      | | | | |     G
    G       C T T G       G C T G G     C
    G       | | | |                 T T
    T       G A A C
      G A          G     ATGTT
                    T + G
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       G
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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