The detailed information of tRNA gene sequence


Sequence ID>w028060
Genome IDABCS01000023
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 29062
End posion on genome 28988
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
caccccacac
tRNA gene sequence 
AGGACTGTAGCTCAGGGGTAGAGCGCTACCTTGACACGGTAGAGGTCGGCGGTTCAAAGC
CGCCCAGTCCTAACG
Downstream region at tRNA end position 
aagaaagagg
Secondary structure (Cloverleaf model)
>w028060	Val	GAC
                   c      AACG aagaaagagg
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          G A
                    T     C C G C C     A
        G A        A      | | | | |     A
      G     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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