The detailed information of tRNA gene sequence


Sequence ID>w028059
Genome IDABCS01000023
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 51341
End posion on genome 51267
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
accaagctac
tRNA gene sequence 
GGCCCTGTGGTCTAGCGGTTAGGACGGCGGCCTCTCACGCCGCAATCCCGAGTTCGATTC
TCGGCAGGGTCACGC
Downstream region at tRNA end position 
tgaacccccg
Secondary structure (Cloverleaf model)
>w028059	Glu	CTC
                   c      ACGC tgaacccccg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     G G C T C     A
      C G A        G      | | | | |     G
    G       T C T G       C C G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AATC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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