The detailed information of tRNA gene sequence


Sequence ID>w028057
Genome IDABCS01000023
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 76469
End posion on genome 76394
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tccggggcgc
tRNA gene sequence 
GCGCTCGTAGCTCAGCCGGAAGAGCGCAGGATTCCTAATCCTGAGGCCGCAGGTTCGAAC
CCTGCCGGGCGCAAGC
Downstream region at tRNA end position 
tcaaacttcg
Secondary structure (Cloverleaf model)
>w028057	Arg	CCT
                   c      AAGC tcaaacttcg
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          C A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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