The detailed information of tRNA gene sequence


Sequence ID>w028056
Genome IDABCS01000023
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 84622
End posion on genome 84534
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ccgagctcgT
tRNA gene sequence 
GCCAGAGTGGCGAAATCGGTAGACGCAGCGGACTCAAAATCCGCCGGGGGAGACTCTGTG
CCGGTTCGAGTCCGGCCTCTGGTACTC
Downstream region at tRNA end position 
Gaaaggcccc
Secondary structure (Cloverleaf model)
>w028056	Leu	CAA
                   T      ACTC Gaaaggcccc
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    C       A G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGGGGAGACTCTGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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