The detailed information of tRNA gene sequence


Sequence ID>w028053
Genome IDABCS01000016
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 79551
End posion on genome 79476
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctgcgccccc
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCAGGGGTTCGATC
CCCCTCAGCTCCAAAA
Downstream region at tRNA end position 
ggtcttggcc
Secondary structure (Cloverleaf model)
>w028053	Ala	CGC
                   c      AAAA ggtcttggcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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