The detailed information of tRNA gene sequence


Sequence ID>w028052
Genome IDABCS01000016
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 41629
End posion on genome 41718
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaggtctcT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGAAGGTGCATGACTGGAATTCATGTGTGGGGCAACCCACC
GCGGGTTCGAATCCCGCCCTCTCCGCCG
Downstream region at tRNA end position 
Gttccatacg
Secondary structure (Cloverleaf model)
>w028052	Ser	GGA
                   T      GCCG Gttccatacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | |                   T T
    T       A G G T
      C G A        G     TGTGGGGCAACCCACC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       T
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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