The detailed information of tRNA gene sequence


Sequence ID>w028050
Genome IDABCS01000015
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 4347
End posion on genome 4423
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctcgggtct
tRNA gene sequence 
GGTGTGATGGCGGAAATGGCTAACGCGCGTGGCTGCAGTCCACGAGACTTCCGGTTCGAG
TCCGGATCGCACCTCTT
Downstream region at tRNA end position 
tccttccccc
Secondary structure (Cloverleaf model)
>w028050	Cys	GCA
                   t      TCTT tccttccccc
                     G - C
                     G - C
                     T - A
                     G - C
                     T + G
                     G - C
                     A - T          T G
                    T     A G G C C     A
      A A A        G      | | | | |     G
    T       G G C G       T C C G G     C
    G         | | |                 T T
    G       A C G C
      C T A        G     AGACT
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       T
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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