The detailed information of tRNA gene sequence


Sequence ID>w028049
Genome IDABCS01000015
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 4137
End posion on genome 4211
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttccattcac
tRNA gene sequence 
GGAGATGTAGCTCAACGGGAGAGCACGATGCTGGCAGCGTCGCGGTTGAGGGTTCGAATC
CCTCCATCTCCATCC
Downstream region at tRNA end position 
atgcttttcg
Secondary structure (Cloverleaf model)
>w028049	Ala	GGC
                   c      ATCC atgcttttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
        A A        A      | | | | |     G
      C     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     CGGTT
                    C - G
                    G - C
                    A - T
                    T + G
                    G - C
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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