The detailed information of tRNA gene sequence


Sequence ID>w028048
Genome IDABCS01000015
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 3819
End posion on genome 3893
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcacaaacac
tRNA gene sequence 
GGGCTGCTGGCTCAATGGGAGAGCACCTGGCTTGCATCCAGGGGGGTATCGGTTCGAATC
CGATGCGGTCCACAA
Downstream region at tRNA end position 
ccagaaaaac
Secondary structure (Cloverleaf model)
>w028048	Ala	TGC
                   c      ACAA ccagaaaaac
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     G - C
                     C - G          T A
                    T     T A G C C     A
        A A        G      | | | | |     G
      T     C T C G       A T C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGGT
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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