The detailed information of tRNA gene sequence


Sequence ID>w028047
Genome IDABCS01000015
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 3720
End posion on genome 3795
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cccacatcac
tRNA gene sequence 
GTGCATGGAGCTCGGTTGGCAGAGCACGACACTTCCAATGTTGAGGAAGCGGGTTCGATT
CCCGTCATGCACTCTA
Downstream region at tRNA end position 
gattccaaga
Secondary structure (Cloverleaf model)
>w028047	Gly	TCC
                   c      TCTA gattccaaga
                     G - C
                     T - A
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    G     T G C C C     A
      T G G        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGAA
                    C - G
                    G + T
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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