The detailed information of tRNA gene sequence


Sequence ID>w028045
Genome IDABCS01000012
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 39197
End posion on genome 39288
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaccactcaC
tRNA gene sequence 
GGGGAAGTGGCCGAGCGGTTTAAGGCGACGGACTTGAAATCCGTTGTACTCGAAAGGGTA
CCCAGGGTTCGAATCCCTGCTTCTCCGCAT
Downstream region at tRNA end position 
Caacgaggga
Secondary structure (Cloverleaf model)
>w028045	Ser	TGA
                   C      GCAT Caacgaggga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTCGAAAGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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