The detailed information of tRNA gene sequence


Sequence ID>w028044
Genome IDABCS01000011
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 129924
End posion on genome 129848
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaacatcga
tRNA gene sequence 
GCCGAGGTAGCTCAGCTGGTTAGAGCGGAGGATTCATAACCCTCAGGTCGGCAGTTCAAG
TCTGCCCCCCGGCACAC
Downstream region at tRNA end position 
atgcggagag
Secondary structure (Cloverleaf model)
>w028044	Met	CAT
                   a      ACAC atgcggagag
                     G - C
                     C - G
                     C - G
                     G - C
                     A   C
                     G - C
                     G - C          T G
                    T     C C G T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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