The detailed information of tRNA gene sequence


Sequence ID>w028043
Genome IDABCS01000011
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 118586
End posion on genome 118661
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccccgctttc
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGCAGCGGTTTCGTAAACCGCAGGTCGCAGGTTCAAGT
CCTGTTCTGGGCTCCC
Downstream region at tRNA end position 
gagaggccgc
Secondary structure (Cloverleaf model)
>w028043	Thr	CGT
                   c      TCCC gagaggccgc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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