The detailed information of tRNA gene sequence


Sequence ID>w028042
Genome IDABCS01000011
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 69731
End posion on genome 69807
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgacgctcga
tRNA gene sequence 
TGCGGGGTGGAGCAGCCAGGTAGCTCGCCGGGCTCATAACCCGGAGGCCACAGGTTCAAA
TCCTGTCCCCGCTACTC
Downstream region at tRNA end position 
tcgaagacct
Secondary structure (Cloverleaf model)
>w028042	Met	CAT
                   a      ACTC tcgaagacct
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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