The detailed information of tRNA gene sequence


Sequence ID>w028035
Genome IDABCS01000007
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 22436
End posion on genome 22356
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
gcatcctcaT
tRNA gene sequence 
CCCGAGGTACGCAAACTGGCAAAGCGGCACAGTTGAGCGCTGTGTGACTCTGCGGGTTCG
ACTCCCGCTCTCGGGACTC
Downstream region at tRNA end position 
Catctctagg
Secondary structure (Cloverleaf model)
>w028035	Leu	GAG
                   T      ACTC Catctctagg
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T C
                    T     C G C C C     A
      C A A        A      | | | | |     G
    T       A C G C       G C G G G     C
    G         | | |                 T T
    G       A G C G
      C A A        G     TGACTCT
                    C - G
                    A - T
                    C - G
                    A - T
                    G - C
                  T       G
                  T       C
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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