The detailed information of tRNA gene sequence


Sequence ID>w028034
Genome IDABCS01000005
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 156795
End posion on genome 156870
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcgtcccacc
tRNA gene sequence 
GGGCTTGTAGCTCAATTGGCAGAGCAGCGGACTCTTAATCCGCGGGTTGTAGGTTCGATT
CCTACCAGGCTCACTC
Downstream region at tRNA end position 
ccgagaccgc
Secondary structure (Cloverleaf model)
>w028034	Lys	CTT
                   c      ACTC ccgagaccgc
                     G - C
                     G + T
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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