The detailed information of tRNA gene sequence


Sequence ID>w028033
Genome IDABCS01000005
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 104043
End posion on genome 104127
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ccgcccagcc
tRNA gene sequence 
GCGAGGGTGGCGGAATTGGTAGACGCGCACGGTTCAGGTCCGTGTGTCTTCGGACGTGGG
GGTTCAAGTCCCTTTCCTCGCACTC
Downstream region at tRNA end position 
agagaccttc
Secondary structure (Cloverleaf model)
>w028033	Leu	CAG
                   c      ACTC agagaccttc
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T          T G
                    T     T T C C C     A
      T A A        G      + + | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCTTCGGACGT
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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