The detailed information of tRNA gene sequence


Sequence ID>w028031
Genome IDABCS01000004
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 30559
End posion on genome 30637
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtggttcaT
tRNA gene sequence 
CGCGGGGTAGAGGAGCAGGTTCCCTCGCGGGGCTCATAATCCCGAGCACGCCGGTTCGAA
TCCGGCCCCCGCAATCG
Downstream region at tRNA end position 
Acattgccca
Secondary structure (Cloverleaf model)
>w028031	Met	CAT
                   T      ATCG Acattgccca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | | | |     G
    A       G G A G       G C C G G     C
    G       | | | |                 T T
    G       C C T C
      T T C        G     AGCAC
                    C - G
                    G - C
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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