The detailed information of tRNA gene sequence


Sequence ID>w028028
Genome IDABCS01000001
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 282923
End posion on genome 282847
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcccgactaT
tRNA gene sequence 
CGAGATGAGGCGCAGTGGTCGCGCACCGGTTTCGGAAACCGGGGGTCGCCGGTTCGAGTC
CGGTCATCTCGACTT
Downstream region at tRNA end position 
Tcatgcatca
Secondary structure (Cloverleaf model)
>w028028	Pro	CGG
                   T      ACTT Tcatgcatca
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    A     T G G C C     A
        G A        G      + | | | |     G
      T     C G C G       G C C G G     C
      G     | | | |                 T T
      G     G C G C
        T C        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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