The detailed information of tRNA gene sequence


Sequence ID>w028027
Genome IDABCS01000001
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 283121
End posion on genome 283032
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tcccgactcT
tRNA gene sequence 
CCATGGGACGCCTCAATGGTGAGGCAGCGGTTTGTAGTGCCGTGGCGTCTTCGGACGTGG
GCAGGTTCGATCCCTGCCCCATGGACTT
Downstream region at tRNA end position 
Cgcccctcat
Secondary structure (Cloverleaf model)
>w028027	Tyr	GTA
                   T      ACTT Cgcccctcat
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          C T
                    A     C G T C C     A
      A A C        C      | | | | |     G
    T       T C C G       G C A G G     C
    G       | | | |                 T T
    G       A G G C
      T G          A     GGCGTCTTCGGACGTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       T
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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