The detailed information of tRNA gene sequence


Sequence ID>w027721
Genome IDABCK01000035
Search identical group
Phylum/ClassLentisphaerota
SpeciesLentisphaera araneosa HTCC2155 [ABCK]
Start position on genome 32242
End posion on genome 32333
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acactcaagC
tRNA gene sequence 
GGAAGAGTGGTCGAGTGGTTTAAGGCGTCGGTCTTGAAAACCGAAGAGGGTGCAAGTCCT
CCGTGAGTTCGAATCTCACCTCTTCCGCCA
Downstream region at tRNA end position 
Tttattttct
Secondary structure (Cloverleaf model)
>w027721	Ser	TGA
                   C      GCCA Tttattttct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G A G     C
    G         | + |                 T T
    T       A G G C
      T T A        G     AGAGGGTGCAAGTCCTCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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