The detailed information of tRNA gene sequence


Sequence ID>w027711
Genome IDABCK01000020
Search identical group
Phylum/ClassLentisphaerota
SpeciesLentisphaera araneosa HTCC2155 [ABCK]
Start position on genome 30056
End posion on genome 29965
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accaaaaagC
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGCGTCCCTGCTAAGGATGTGTACTCGCAAGGGTA
CCGAGAGTTCGAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
Cacttttgaa
Secondary structure (Cloverleaf model)
>w027711	Ser	GCT
                   C      GCCA Cacttttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGTACTCGCAAGGGTACC
                    C - G
                    G + T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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