The detailed information of tRNA gene sequence


Sequence ID>w027460
Genome IDABCE01000055
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGimesia maris DSM 8797 [ABCE]
Start position on genome 22884
End posion on genome 22793
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagcattca
tRNA gene sequence 
GGAGAGATGGCAGAGTGGCCGAATGCGCCGGTTTGCTAAACCGGTGAGCCGTGCAAACGG
TTCCACGGGTTCGAATCCCGTTCTCTCCGTTT
Downstream region at tRNA end position 
atagaattca
Secondary structure (Cloverleaf model)
>w027460	Ser	GCT
                   a      GTTT atagaattca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A C G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        G     TGAGCCGTGCAAACGGTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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