The detailed information of tRNA gene sequence


Sequence ID>w027438
Genome IDABCE01000017
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGimesia maris DSM 8797 [ABCE]
Start position on genome 123407
End posion on genome 123316
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gagccacccC
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGCCGATTGTGCAGCACTGGAAATGCTGTGTCTCGGAAACGGGA
CCGGGGGTTCGAATCCCCCTCTCTCCGCTT
Downstream region at tRNA end position 
Atttttgtac
Secondary structure (Cloverleaf model)
>w027438	Ser	GGA
                   C      GCTT Atttttgtac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | +                 T T
    C       T T G T
      C G A        G     TGTCTCGGAAACGGGACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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