The detailed information of tRNA gene sequence


Sequence ID>w023580
Genome IDAAXZ01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodobacteraceae bacterium HTCC2150 HTCC2150 [AAXZ]
Start position on genome 727662
End posion on genome 727738
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctacgttttc
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCCGGGGTTCAAG
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
aacatcttgt
Secondary structure (Cloverleaf model)
>w023580	Met	CAT
                   c      ACCA aacatcttgt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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