The detailed information of tRNA gene sequence


Sequence ID>w023574
Genome IDAAXZ01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodobacteraceae bacterium HTCC2150 HTCC2150 [AAXZ]
Start position on genome 21819
End posion on genome 21742
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgctaggcaT
tRNA gene sequence 
AGGGGTTTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCAAGAGTTCGAGT
CTCTTAGCCCCTGCCA
Downstream region at tRNA end position 
Cttcactttc
Secondary structure (Cloverleaf model)
>w023574	Trp	CCA
                   T      GCCA Cttcactttc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A          T G
                    T     T T C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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