The detailed information of tRNA gene sequence


Sequence ID>w021680
Genome IDAAVV01000020
Search identical group
Phylum/ClassGammaproteobacteria
Speciesmarine gamma proteobacterium HTCC2080 [AAVV]
Start position on genome 15772
End posion on genome 15850
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccctttgT
tRNA gene sequence 
GGCTACGTAGCTCAGCTGGTTAGAGCACAGCATTCATAATGCTGGGGTCGGTGGTTCAAG
TCCACCCGTAGCTACCA
Downstream region at tRNA end position 
Ttcctctctt
Secondary structure (Cloverleaf model)
>w021680	Met	CAT
                   T      ACCA Ttcctctctt
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T G
                    T     C C A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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