The detailed information of tRNA gene sequence


Sequence ID>w021467
Genome IDAAVR01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia massiliae MTU5 [AAVR]
Start position on genome 24029
End posion on genome 24103
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gccaaattaa
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACATCACCCTTTCACGGTGGGAACACGGGTTCGAGTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
ttctatattt
Secondary structure (Cloverleaf model)
>w021467	Glu	TTC
                   a      ACCA ttctatattt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     GAAC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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