The detailed information of tRNA gene sequence


Sequence ID>w020487
Genome IDAAUX01000001
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMethylophilales bacterium HTCC2181 [AAUX]
Start position on genome 955790
End posion on genome 955697
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcttcgagtC
tRNA gene sequence 
GGAAGGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAAAGCGTGTTTAGGGTGAACTCCC
TAACGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
Tactgcatgt
Secondary structure (Cloverleaf model)
>w020487	Ser	GGA
                   C      GCCA Tactgcatgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTTAGGGTGAACTCCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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