The detailed information of tRNA gene sequence


Sequence ID>w020446
Genome IDAAUW01000012
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseibium aggregatum IAM 12614 [AAUW]
Start position on genome 132466
End posion on genome 132394
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggacttctga
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCGGGTTCGAAC
CCTGCTGCCCCTGcca
Downstream region at tRNA end position 
atttgctctt
Secondary structure (Cloverleaf model)
>w020446	Trp	CCA
                   a      Gcca atttgctctt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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