The detailed information of tRNA gene sequence


Sequence ID>w020253
Genome IDAAUT01000003
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae 2740-80 [AAUT]
Start position on genome 40811
End posion on genome 40900
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaacgattC
tRNA gene sequence 
GGTGAGTTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGAGTTCGAATCTCTCACTCACCGCCA
Downstream region at tRNA end position 
Cattcaagtt
Secondary structure (Cloverleaf model)
>w020253	Ser	GGA
                   C      GCCA Cattcaagtt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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