The detailed information of tRNA gene sequence


Sequence ID>w019869
Genome IDAAUM01000044
Search identical group
Phylum/ClassChloroflexota
SpeciesRoseiflexus castenholzii DSM 13941 [AAUM]
Start position on genome 9008
End posion on genome 9083
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gctttgtttc
tRNA gene sequence 
GGGGCGGTAGCTCAGTTGGGAGAGCGGCTGCTTTGCACGCAGCAGGTCCGGGGTTCGAAT
CCCCGTCGCTCCACCA
Downstream region at tRNA end position 
gacgaacacg
Secondary structure (Cloverleaf model)
>w019869	Ala	TGC
                   c      ACCA gacgaacacg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     G C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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