The detailed information of tRNA gene sequence


Sequence ID>w019860
Genome IDAAUM01000033
Search identical group
Phylum/ClassChloroflexota
SpeciesRoseiflexus castenholzii DSM 13941 [AAUM]
Start position on genome 15405
End posion on genome 15482
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catgcgctcT
tRNA gene sequence 
GCCGGTGTAGCTCAGTGGTTAGAGCGAACGACTCATAATCGTTAGGTCACTGGTTCGATC
CCAGTCACCGGCACCA
Downstream region at tRNA end position 
Tatctccaca
Secondary structure (Cloverleaf model)
>w019860	Met	CAT
                   T      ACCA Tatctccaca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T G A C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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