The detailed information of tRNA gene sequence


Sequence ID>w019858
Genome IDAAUM01000025
Search identical group
Phylum/ClassChloroflexota
SpeciesRoseiflexus castenholzii DSM 13941 [AAUM]
Start position on genome 78068
End posion on genome 77976
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acacaaacaC
tRNA gene sequence 
GGGGAGGTCGCATAGTGGCCTAGTGCGCGGCACTGGAAATGCCGTAGGGGGTACTCCCCC
CTCGCGGGTTCAAATCCCGCCCTCCCCGCCA
Downstream region at tRNA end position 
Gcaggggcgc
Secondary structure (Cloverleaf model)
>w019858	Ser	GGA
                   C      GCCA Gcaggggcgc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAGGGGGTACTCCCCCCTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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