The detailed information of tRNA gene sequence


Sequence ID>w019856
Genome IDAAUM01000025
Search identical group
Phylum/ClassChloroflexota
SpeciesRoseiflexus castenholzii DSM 13941 [AAUM]
Start position on genome 81458
End posion on genome 81549
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgattcagtg
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTTGTAATGCAGTCGTCTTGAAAACGACCGGCCCTTCAACAAG
GCCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ccggaatata
Secondary structure (Cloverleaf model)
>w019856	Ser	TGA
                   g      GCCA ccggaatata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  T           | | |                 T T
  T         A T G C
    G T A          A     CGGCCCTTCAACAAGGCCC
                    G - C
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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