The detailed information of tRNA gene sequence


Sequence ID>w019846
Genome IDAAUM01000016
Search identical group
Phylum/ClassChloroflexota
SpeciesRoseiflexus castenholzii DSM 13941 [AAUM]
Start position on genome 21384
End posion on genome 21461
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgatcgtcgT
tRNA gene sequence 
GCGGGCGTAGCTCAGTGGATAGAGCAGCGGTCTTCTAAACCGTTGGTCGGGCGTTCGAGT
CGCCCCGCCCGCGCCA
Downstream region at tRNA end position 
Ctcctcgtca
Secondary structure (Cloverleaf model)
>w019846	Arg	TCT
                   T      GCCA Ctcctcgtca
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C G C     A
      T G A        A      | | | | |     G
    G       C T C G       G G G C G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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