The detailed information of tRNA gene sequence


Sequence ID>w019843
Genome IDAAUM01000012
Search identical group
Phylum/ClassChloroflexota
SpeciesRoseiflexus castenholzii DSM 13941 [AAUM]
Start position on genome 40268
End posion on genome 40191
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcatcgctgT
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGCGACAATCGCACTGTCGAGGTCAGGGGTTCGAGC
CCCCTCACCTCCACCA
Downstream region at tRNA end position 
Aagcacgggg
Secondary structure (Cloverleaf model)
>w019843	Ala	CGC
                   T      ACCA Aagcacgggg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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