The detailed information of tRNA gene sequence


Sequence ID>w019758
Genome IDAAUK01000035
Search identical group
Phylum/ClassThermotogota
SpeciesFervidobacterium nodosum Rt17-B1 [AAUK]
Start position on genome 209
End posion on genome 286
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccacatgagT
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTAGAGCATCCGGCTCATAACCGGACGGTCGGGGGTTCGATC
CCTCCCGAGCCCACCA
Downstream region at tRNA end position 
Gttcttttaa
Secondary structure (Cloverleaf model)
>w019758	Met	CAT
                   T      ACCA Gttcttttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          C T
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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