The detailed information of tRNA gene sequence


Sequence ID>w019729
Genome IDAAUK01000005
Search identical group
Phylum/ClassThermotogota
SpeciesFervidobacterium nodosum Rt17-B1 [AAUK]
Start position on genome 18757
End posion on genome 18846
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cactttggtC
tRNA gene sequence 
GGAGGCGTGTCCGAATGGCTAAGGAGCCGGTCTCGAAAATCGGTGGGCTTCACAGCCCTT
GTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
Attttagttt
Secondary structure (Cloverleaf model)
>w019729	Ser	CGA
                   C      GCCA Attttagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T A          G     TGGGCTTCACAGCCCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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