The detailed information of tRNA gene sequence


Sequence ID>w019213
Genome IDAAUA01000004
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. RS9916 [AAUA]
Start position on genome 61699
End posion on genome 61774
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgttgcgaa
tRNA gene sequence 
GGGGGTCTAGCAATCTGGTGAATGCAGCGAACTCATAATTCGCCTAAGGCGAGTTCGATC
CTCGCGACCCCCATTC
Downstream region at tRNA end position 
acaccgtctg
Secondary structure (Cloverleaf model)
>w019213	Met	CAT
                   a      ATTC acaccgtctg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G          C T
                    T     C G C T C     A
      T C T        A      | | | | |     G
    G       A A C G       G C G A G     C
    G         | | |                 T T
    T       A T G C
      G A          A     CTAAG
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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