The detailed information of tRNA gene sequence


Sequence ID>w019212
Genome IDAAUA01000003
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. RS9916 [AAUA]
Start position on genome 17498
End posion on genome 17424
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tcctccacat
tRNA gene sequence 
GCCCTTGTAGCTCAGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCACGAGTTCAAGTC
TCGTCAAGGGCTCTT
Downstream region at tRNA end position 
ttccattccc
Secondary structure (Cloverleaf model)
>w019212	Thr	GGT
                   t      TCTT ttccattccc
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    T     T G C T C     A
        G A        A      | | | | |     A
      C     C T C G       A C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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