The detailed information of tRNA gene sequence


Sequence ID>w019208
Genome IDAAUA01000002
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. RS9916 [AAUA]
Start position on genome 406665
End posion on genome 406754
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagcccgccT
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTGATGGCTCTGGTCTTGAAAACCAGCGAGGTGCGAGCCTCC
GTGGGTTCGAATCCCACCCTCTCCGTTT
Downstream region at tRNA end position 
Acgaaaaccc
Secondary structure (Cloverleaf model)
>w019208	Ser	TGA
                   T      GTTT Acgaaaaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G       + | + |                 T T
    T       T G G C
      T G A        T     CGAGGTGCGAGCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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