The detailed information of tRNA gene sequence


Sequence ID>w019207
Genome IDAAUA01000002
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. RS9916 [AAUA]
Start position on genome 347724
End posion on genome 347800
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcgaagtcc
tRNA gene sequence 
GACAGGGTAGCTCAGCTGGTTAGAGCGGCGGATTCATAACCCGCAGGTCGGGAGTTCAAG
TCTCCCCCTTGTCATTA
Downstream region at tRNA end position 
aaaaagcccg
Secondary structure (Cloverleaf model)
>w019207	Met	CAT
                   c      ATTA aaaaagcccg
                     G - C
                     A - T
                     C - G
                     A - T
                     G + T
                     G - C
                     G - C          T G
                    T     C C C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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